Statistical Atlas

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Um projeto em curso que pretende criar mapas temáticos de todos os dados existentes nos EUA, ambicioso, não?

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KNIME Image Processing (trusted extension)

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Apenas um exemplo das fantásticas possibilidades do KNIME

KNIME Image Processing (trusted extension)

Fri, 12/03/2010 – 13:09 — knime_admin


Overview

The KNIME Image Processing Plugin allows you to read in more than 120 different kinds of images (thanks to the Bio-Formats API) and to apply well known methods on images, like preprocessing. segmentation, feature extraction, tracking and classification in KNIME. In general these nodes operate on multi-dimensional image data (e.g. videos, 3D images, multi-channel images or even a combination of them), which is made possible by the internally used ImgLib2-API.

Several nodes are available to calculate image features (e.g. zernike-, texture- or histogram features) for segmented images (e.g. a single cell). These feature vectors can then be used to apply machine learning methods in order to train and apply a classifier.

Currently the Image Processing Plugin for KNIME provides ca. 100 nodes for (pre)-processing, filtering, segmentation, feature extraction, various views (2D, 3D), etc. and integrations for various other image processing tools are available (see used and integrated libraries)

Future directions include a full, bidirectional integration of ImageJ2. Such an integration allow the users to use directly use/update ImageJ2 Plugins inside KNIME as well as recording and running KNIME Workflows in ImageJ2. Please see ImageJ2 Integration (BETA) for more information.

For the first steps please consider the KNIME Image Processing User Manual (incomplete draft!).

Important Links

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Real Chart Rules to Follow

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Excelente guia sobre construção de gráficos para representar dados.

There are a lot of “rules” for visualization. Some are actual rules, and some are suggestions to help you make choices. Many of the former can be broken, if that’s what the data dictates and you know what you’re doing.

But, there are rules—usually for specific chart types meant to be read in a specific way and with few exceptions—that you shouldn’t break. When they are, everyone loses. This is that small handful.

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Ternary Diagrams Using R

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Ensina a construir um diagrama ternário no R

Ternary Diagrams Using R: The ggtern Package

A tutorial by Douglas M. Wiig

There are a number of very useful and popular graphics packages available for R such as lattice, ggplot, ggplot2 and others. Some of these offer general purpose graphics capabilities and others are more specialized. A recently developed extension to the ggplot2 package is ggtern. This package is essentially a wrapper for a number of functions that can be used to create a variety of ternary diagrams. Ternary diagrams are useful when analyzing the relationship among three factors or elements. A ternary diagram essentially represents the proportions of three related factors in two-dimensional space.

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Comprehensive Guide to Data Visualization in R

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Bom resumo de alguns tipos de gráficos que podem ser obtidos no R, do mais simples a alguns mais complexos.

This visualization (originally created using Tableau) is a great example of how data visualization can help decision makers. Imagine telling this information to an investor through a table. How long do you think you will take to explain it to him?

With ever increasing volume of data in today’s world, it is impossible to tell stories without these visualizations. While there are dedicated tools like Tableau, QlikView and d3.js, nothing can replace a modeling / statistics tools with good visualization capability. It helps tremendously in doing any exploratory data analysis as well as feature engineering. This is where R offers incredible help.

R Programming offers a satisfactory set of inbuilt function and libraries (such as ggplot2, leaflet, lattice) to build visualizations and present data. In this article, I have covered the steps to create the common as well as advanced visualizations in R Programming.

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Free Social Media Tools

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Uma imagem do tipo infografic com 19 aplicativos e serviços que podem fornecer informação estatística útil para profissionais de marketing digital ou quem pretende criar um website bem sucedido

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visualização do intervalo de confiança

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Boa forma de visualizar o conceito de Intervalo de Confiança Aleatório.

About the visualization

Some say that a shift from hypothesis testing to confidence intervals and estimation will lead to fewer statistical misinterpretations. Personally, I am not sure about that. But I agree with the sentiment that we should stop reducing statistical analysis to binary decision-making. The problem with CIs is that they are as unintuitive and as misunderstood p-values and null hypothesis significance testing. Moreover, CIs are often used to perform hypothesis tests and are therefore prone to the same misuses as p-values.

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CRAN Task Views

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Uma lista de temas com uma descrição dos principais pacotes R ligados ao tema

CRAN Task Views

Bayesian Bayesian Inference
ChemPhys Chemometrics and Computational Physics
ClinicalTrials Clinical Trial Design, Monitoring, and Analysis
Cluster Cluster Analysis & Finite Mixture Models
DifferentialEquations Differential Equations
Distributions Probability Distributions
Econometrics Econometrics
Environmetrics Analysis of Ecological and Environmental Data
ExperimentalDesign Design of Experiments (DoE) & Analysis of Experimental Data
Finance Empirical Finance
Genetics Statistical Genetics
Graphics Graphic Displays & Dynamic Graphics & Graphic Devices & Visualization
HighPerformanceComputing High-Performance and Parallel Computing with R
MachineLearning Machine Learning & Statistical Learning
MedicalImaging Medical Image Analysis
MetaAnalysis Meta-Analysis
Multivariate Multivariate Statistics
NaturalLanguageProcessing Natural Language Processing
NumericalMathematics Numerical Mathematics
OfficialStatistics Official Statistics & Survey Methodology
Optimization Optimization and Mathematical Programming
Pharmacokinetics Analysis of Pharmacokinetic Data
Phylogenetics Phylogenetics, Especially Comparative Methods
Psychometrics Psychometric Models and Methods
ReproducibleResearch Reproducible Research
Robust Robust Statistical Methods
SocialSciences Statistics for the Social Sciences
Spatial Analysis of Spatial Data
SpatioTemporal Handling and Analyzing Spatio-Temporal Data
Survival Survival Analysis
TimeSeries Time Series Analysis
WebTechnologies Web Technologies and Services
gR gRaphical Models in R

To automatically install these views, the ctv package needs to be installed, e.g., via
install.packages("ctv")
library("ctv")
and then the views can be installed via install.views or update.views (which first assesses which of the packages are already installed and up-to-date), e.g.,
install.views("Econometrics")
or
update.views("Econometrics")

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Best Uses of Data Visualization

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Um curto mas bom vídeo sobre as várias facetas da visualização de dados.

Best Uses of Data Visualization
February 1, 2015

Data visualizations are everywhere these days, and why? Think of data visualization as information at a glance, a kind of language of statistics for the eyes.

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Base R Version

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Excelentes exemplos de gráficos que podem usar nos trabalhos.

One Variable: Numeric Variable

One Variable: Factor Variable

Two Variables: Two Numeric Variables

Two Variables: Two Factor Variables

Two Variables: One Factor and One Numeric

Three Variables: Three Factor Variables

Three Variables: One Numeric and Two Factor Variables

Three Variables: Two Numeric and One Factor Variables

Three Variables: Three Numeric Variables

Scatterplot Matrix of all Numeric Vars, colored by a Factor variable

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